Autoimmune disease symptoms: What are the early signs of autoimmune disease?

Medically reviewed by Marissa WalshPharm.D., BCPS-AQ ID
Licensed Pharmacist
Updated Oct. 27, 2023  •  Published Aug. 9, 2023
Fact Checked
Autoimmune disease symptoms: What are the early signs of autoimmune disease?

Overview: What does autoimmune disease feel or look like?

The body has natural defenses to protect us from pathogens and other foreign substances. Our main defense is the immune system, a complex system of white blood cells, antibodies, proteins, and body organs and tissues. The immune system fires up the inflammatory response when the body detects tissue damage, invading organisms, or unfamiliar objects. The swelling, redness, and discomfort are in direct response to the immune system’s activation to identify and kill off invading pathogens or substances. Sometimes, however, the immune system mistakenly identifies healthy tissues as foreign and initiates an attack; this is the underlying mechanism of autoimmune diseases. There are over 80 autoimmune diseases and an almost equal number of suspected ones. Some are fairly common, such as rheumatoid arthritis, and some are so rare that only a few hundred people have the disease. These diseases are very specific to certain substances or chemicals normally found in the body. Some autoimmune diseases are relatively mild; some progressively sicken the body, and some can be immediately life-threatening, like catastrophic antiphospholipid syndrome.

What an autoimmune disease feels or looks like will depend on what part of the body is targeted by the immune system. The most common autoimmune diseases typically cause problems with the skin, joints, digestive system, nerves, blood, and hormone glands. Swelling, pain, skin rashes, skin redness, feeling sick, nausea, fatigue, and weakness are all possible symptoms depending on the type of autoimmune disease.

RELATED: What is inflammation? | What causes inflammation?

Key takeaways:

  • Autoimmune diseases are common health conditions that can affect anyone regardless of age, sex, race, or ethnicity. Find updated arthritis statistics here, multiple sclerosis statistics here, and diabetes statistics here.

  • Early signs of an autoimmune disease will vary depending on the disease and may include swelling, redness, pain, feeling bad, tiredness, fever, swollen glands, and similar symptoms.

  • Serious symptoms of autoimmune diseases, such as trouble breathing, chest pain, or severe pain, may require immediate medical attention. However, the severity of symptoms will depend on the specific disease, so talk to a healthcare professional about what symptoms should trigger a visit to the emergency room.

  • Genetics, infections, other autoimmune diseases, and environmental triggers cause autoimmune diseases. You may be at higher risk for developing autoimmune disease symptoms if you have relatives with autoimmune disease or are female. Other risk factors include taking certain medications, smoking, chemical exposure, and obesity.

  • Autoimmune diseases usually require a medical diagnosis.

  • Autoimmune diseases generally require treatment. Autoimmune disease symptoms typically improve with treatment on a variable timeline, depending on the type of autoimmune disease.

  • Treatment of autoimmune diseases may include symptom relief medications, corticosteroids, medications that suppress the immune response (e.g., immunosuppressants), intravenous immunoglobulin, or plasma exchange for severe flare-ups. Read more about arthritis treatments, psoriasis treatments, lupus treatments, inflammatory bowel disease treatments, colitis treatments, multiple sclerosis treatments, and myasthenia gravis treatments..

  • Untreated autoimmune diseases could result in complications, depending on the specific disease. Common complications include developing other autoimmune diseases, organ damage, joint damage, and other progressive or chronic problems.

  • Use coupons for autoimmune disease treatments like aspirin, prednisone, Imuran (azathioprine), and Humira (adalimumab) to save up to 80%.

RELATED: Why are autoimmune diseases more common in women?

What are the early signs of autoimmune disease?

The early signs of an autoimmune disease will depend on the specific disease and the part of the body it affects. Pain, swelling, redness, fever, and fatigue are all common initial symptoms of many autoimmune diseases.

Other autoimmune disease symptoms

Symptoms will depend on the type of autoimmune disease. Some autoimmune diseases affect only one part of the body. Some affect one entire system, like the circulatory system or nervous system. Some affect the whole body, like systemic lupus erythematosus (SLE). Symptoms common to most flare-ups include pain, swelling, fever, fatigue, and swollen lymph nodes.

Autoimmune diseases that affect the entire body, such as SLE, Sjogren syndrome, or scleroderma, typically have multiple symptoms, including:

  • Skin rash or other skin problems

  • Joint problems

  • Organ problems

  • Blood problems

  • Nervous system problems

  • Swollen glands

  • Dry eyes

Autoimmune diseases that affect the skin will have various symptoms, but the most common are:

  • Skin rash

  • Hives

  • Itchy skin

  • Skin swelling

  • Dryness

  • Hair loss

Autoimmune diseases that affect joints, connective tissues, and muscles typically have symptoms such as:

  • Joint pain

  • Joint swelling

  • Muscle aches

  • Muscle weakness

Autoimmune diseases of the digestive system will have various symptoms, including:

  • Abdominal pain

  • Diarrhea

  • Constipation

  • Blood in the stools

  • Nausea

  • Vomiting

  • Bloating

Autoimmune diseases of the nervous system can have body-wide effects, including:

  • Headaches

  • Dizziness

  • Mood changes

  • Vision changes

  • Difficulty thinking

  • Changes in sensation

  • Muscle weakness

  • Numbness or tingling

Autoimmune diseases of the blood or blood vessels (vasculitis) can cause symptoms such as:

  • Anemia symptoms

  • Bleeding

  • Blood clots

  • Infections

  • Headaches

  • Rash

  • Skin lumps

  • Skin sores

  • Shortness of breath

Autoimmune disease vs. Lyme disease symptoms 

Lyme disease is a bacterial infection but can look and act much like an autoimmune disease. Lyme disease can cause arthritis, which can easily be mistaken for rheumatoid arthritis. Other Lyme disease symptoms mimic autoimmune diseases: skin rash, fatigue, and swollen glands. Here’s the difference, Lyme disease can be eliminated with antibiotics, but it can cause serious problems if it’s not. The longer Lyme disease goes undiagnosed, the more likely the infection will damage joints, migrate to other organs, cause chronic Lyme disease, or trigger other autoimmune disorders such as rheumatoid arthritis or thyroid disease. For this reason, it is vitally important to test for Lyme antibodies if there’s any chance that symptoms may be due to Lyme disease. Treatment needs to start promptly.

Autoimmune disease Lyme disease
Shared symptoms
  • Joint pain
  • Joint swelling
  • Joint stiffness
  • Muscle pain
  • Skin rash
  • Headache
  • Fever
  • Fatigue
  • Swollen glands
Unique symptoms
  • Initial symptoms are typically flu-like symptoms
  • 70% to 80% of people with Lyme disease have a “bulls-eye” rash that is a hallmark of Lyme disease

RELATED: Lyme disease treatments and medications

When to see a doctor for autoimmune disease symptoms

Make an appointment to see a doctor or other healthcare professional when experiencing any symptom of an autoimmune disease. The inflammatory response can irreversibly damage the body’s tissues, so autoimmune flare-ups need to be brought under control. Autoimmune flare-ups typically don’t require a trip to the ER unless breathing is compromised, there’s chest pain, or unbearable pain.

The initial diagnosis of an autoimmune disease is complex and often time-consuming. A specialist such as a rheumatologist, gastroenterologist, dermatologist, or endocrinologist may need to diagnose and test. Be prepared to tell the clinician about all symptoms and what you know about your family’s health history, particularly any history of autoimmune diseases. 

Aside from a history and a physical examination, numerous blood tests may be required, including:

  • A complete blood count 

  • Comprehensive metabolic panel

  • Enzyme-linked immunosorbent assay (ELISA) to identify specific antibodies

  • An antinuclear antibody test (ANA) to identify autoimmune antibodies for certain types of autoimmune diseases

  • An erythrocyte sedimentation rate (ESR) test to identify an active inflammatory response

  • A C-reactive protein (CRP) test to test how active an inflammatory response is

  • Genetic tests (HLA-typing)

  • The clinician may order other tests to rule out diseases that are not autoimmune diseases

The clinician will rely on more specialized tests to zero in on a specific type of autoimmune disease. For instance: 

Complications of autoimmune disease

The complications of autoimmune disease will vary depending on the condition. The most common complication is developing other autoimmune conditions. One out of four people with an autoimmune disease develops a second one, but researchers do not know why.

The most serious autoimmune diseases, such as multiple sclerosis or myasthenia gravis, are progressive, so people with these conditions get steadily more debilitated. Autoimmune conditions that cause blood clotting, such as antiphospholipid syndrome, can cause organ damage and even death if flare-ups are not brought under control.

How to treat autoimmune disease symptoms

Autoimmune diseases require treatment. Each flare-up can damage tissues or organs and raise the risk of complications. Treatment aims to prevent flare-ups and their associated damage, decrease the duration and severity of inflammatory attacks, and relieve symptoms.

Symptom relief includes painkillers, anti-inflammatory drugs, skin creams, and drugs to treat mood problems like depression or anxiety. 

Clinicians reduce the likelihood of flare-ups by dialing back the immune system using prescription drugs such as:

These drugs are also used to manage active inflammatory episodes. Other treatments for inflammatory episodes include intravenous immunoglobulin and plasma exchange for severe flare-ups. 

Other treatments might consist of hormone therapy or physical therapy.

Living with an autoimmune disease 

Autoimmune diseases are not curable. However, the frequency and severity of flare-ups can be controlled through a few preventive measures:

  • Take medications as instructed

  • Adopt a healthy diet

  • Lose weight and maintain a healthy weight

  • Don’t smoke

  • Exercise

  • Manage stress and practice relaxation techniques

  • Know and avoid triggers

RELATED: Living with lupus: how I found a new normal after my diagnosis

Most importantly, autoimmune diseases can be managed

A diagnosis of an autoimmune disorder can be devastating. With some exceptions, such as Guillain-Barre syndrome, a diagnosis means the disease will be around for a long time—maybe for the rest of your life. Remember, autoimmune diseases can be managed and controlled. Preventive medications, lifestyle changes, avoiding triggers, and prompt medical treatment at the first signs of a flare-up can keep symptoms and complications under control. The first step is diagnosis. If any symptoms of an autoimmune disorder are causing trouble, see a healthcare provider to start the appropriate treatment.

FAQs about autoimmune disease symptoms

What triggers autoimmune symptoms?

Researchers have identified a large and growing number of environmental triggers that can bring on an autoimmune disease or a flare-up. The exact triggers often depend on the type of autoimmune condition. The list includes infections, chemicals, mercury, sunlight, drugs, stress, overwork, overheating, hormones, or foods like gluten (celiac disease).

What autoimmune disease attacks your organs?

Systemic autoimmune diseases such as systemic lupus erythematosus, scleroderma, dermatomyositis, Sjogren syndrome, and rheumatoid arthritis can affect multiple organs in the body. Many other autoimmune disorders target a single organ, like the skin, brain, heart, thyroid gland, pancreas, liver, or intestines.

How do you stop an autoimmune flare-up?

The primary treatment for autoimmune flare-ups is to dial back the immune response. Clinicians use immune-modulating drugs or immunosuppressants. Severe flare-ups may require immunoglobulin injections, or plasma exchange in which blood is filtered and cleared from autoantibodies and replaced by clean plasma by an apheresis machine.

What’s next? Additional resources for people with autoimmune disease symptoms

Test and diagnostics

Treatments

Scientific studies and clinical trials

Medically reviewed by Marissa WalshPharm.D., BCPS-AQ ID
Licensed Pharmacist

Marissa Walsh, Pharm.D., BCPS-AQ ID, graduated with her Doctor of Pharmacy degree from the University of Rhode Island in 2009, then went on to complete a PGY1 Pharmacy Practice Residency at Charleston Area Medical Center in Charleston, West Virginia, and a PGY2 Infectious Diseases Pharmacy Residency at Maine Medical Center in Portland, Maine. Dr. Walsh has worked as a clinical pharmacy specialist in Infectious Diseases in Portland, Maine, and Miami, Florida, prior to setting into her current role in Buffalo, New York, where she continues to work as an Infectious Diseases Pharmacist in a hematology/oncology population.

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